SED-ML web tools: generate, modify and export standard-compliant simulation studies

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Abstract

Summary:

The Simulation Experiment Description Markup Language (SED-ML) is a standardized format for exchanging simulation studies independently of software tools. We present the SED-ML Web Tools, an online application for creating, editing, simulating and validating SED-ML documents. The Web Tools implement all current SED-ML specifications and, thus, support complex modifications and co-simulation of models in SBML and CellML formats. Ultimately, the Web Tools lower the bar on working with SED-ML documents and help users create valid simulation descriptions.

Availability and Implementation:

http://sysbioapps.dyndns.org/SED-ML_Web_Tools/.

Contact:

fbergman@caltech.edu.

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