ISMB 2001
ISMB 2001 Organization
An efficient algorithm for finding short approximate non-tandem repeats
SCOPE
Fast optimal leaf ordering for hierarchical clustering
Separating real motifs from their artifacts
Probe selection algorithms with applications in the analysis of microbial communities
Visualizing associations between genome sequences and gene expression data using genome-mean expression profiles
Gene recognition based on DAG shortest paths
Using mixtures of common ancestors for estimating the probabilities of discrete events in biological sequences
GENIES
An insight into domain combinations
Promoter prediction in the human genome
Disambiguating proteins, genes, and RNA in text
Identifying splits with clear separation
GEST
Probabilistic divergence measures for detecting interspecies recombination
Design of a compartmentalized shotgun assembler for the human genome
Integrating genomic homology into gene structure prediction
Generating protein interaction maps from incomplete data
Feature selection for DNA methylation based cancer classification
New approaches for reconstructing phylogenies from gene order data
Prediction of the coupling specificity of G protein coupled receptors to their G proteins
Non-symmetric score matrices and the detection of homologous transmembrane proteins
Designing fast converging phylogenetic methods
Joint modeling of DNA sequence and physical properties to improve eukaryotic promoter recognition
An algorithm for finding signals of unknown length in DNA sequences
Inferring subnetworks from perturbed expression profiles
Fragment assembly with double-barreled data
Improved prediction of the number of residue contacts in proteins by recurrent neural networks
Rich probabilistic models for gene expression
Designing better phages
Probabilistic approaches to the use of higher order clone relationships in physical map assembly
Computational expansion of genetic networks
Separation of samples into their constituents using gene expression data
0j.py
Protein-protein interaction map inference using interacting domain profile pairs
CLIFF
Molecular classification of multiple tumor types
Centralization