Combining DNA expression with positional information to detect functional silencing of chromosomal regions
Annotation pattern of ESTs from Spodoptera frugiperda Sf9 cells and analysis of the ribosomal protein genes reveal insect-specific features and unexpectedly low codon usage bias
JXP4BIGI
Efficient estimation of emission probabilities in profile hidden Markov models
Combining phylogenetic data with co-regulated genes to identify regulatory motifs
Scoring clustering solutions by their biological relevance
Classification of protein quaternary structure with support vector machine
Algorithms for large-scale genotyping microarrays
caCORE
Global snapshot of a protein interaction network—a percolation based approach
SEMEDA
Susceptibility of non-linear systems as an approach to metabolic responses
Metabolic pathways in three dimensions
Accelerating screening of 3D protein data with a graph theoretical approach
A random variance model for detection of differential gene expression in small microarray experiments
Assessing sequence comparison methods with the average precision criterion
Using credibility intervals instead of hypothesis tests in SAGE analysis
A CART-based approach to discover emerging patterns in microarray data
The MUSC DNA Microarray Database
MREPATT
gf2aplot
MUTAGEN
LOX-DB—a database on lipoxygenases
GoFigure
PRIMEX
KISS for STRAP
SNOW
Machaon CVE
DnaSP, DNA polymorphism analyses by the coalescent and other methods
SPEPlip
ModLoop
Characterizing gene sets with FuncAssociate