Guest Editor Preface
A strategy for assembling the maize (Zea mays L.) genome
Multi-species comparative mapping in silico using the COMPASS strategy
Transposable element annotation of the rice genome
Computational identification of novel chitinase-like proteins in the Drosophila melanogaster genome
Phylogenomic inference of protein molecular function
A comparative phylogenetic approach for dating whole genome duplication events
Prediction of locally stable RNA secondary structures for genome-wide surveys
Shared relationship analysis
Limited conformational space for early-stage protein folding simulation
Comparative evaluation of word composition distances for the recognition of SCOP relationships
GAPSCORE
Minimal cut sets in biochemical reaction networks
An empirical bayes adjustment to increase the sensitivity of detecting differentially expressed genes in microarray experiments
Graph-based clustering for finding distant relationships in a large set of protein sequences
Is cross-validation better than resubstitution for ranking genes?
Formalization of mouse embryo anatomy
The Helmholtz Network for Bioinformatics
ROSO
LVB
PGTdb
JDotter
FGDP
YETI
EST-PAGE—managing and analyzing EST data
APE
AnaGram
A novel approach to fold recognition using sequence-derived properties from sets of structurally similar local fragments of proteins