MatInspector and beyond: promoter analysis based on transcription factor binding sites
SWIFT (sequence-wide investigation with Fourier transform): a software tool for identifying proteins of a given class from the unannotated genome sequence
Enhanced statistics for local alignment of multiple alignments improves prediction of protein function and structure
DIG—a system for gene annotation and functional discovery
PROFcon: novel prediction of long-range contacts
FSSA: a novel method for identifying functional signatures from structural alignments
iGNM: a database of protein functional motions based on Gaussian Network Model
Discovering molecular functions significantly related to phenotypes by combining gene expression data and biological information
Segmentation of cDNA Microarray Spots Using Markov Random Field Modeling
Penalized Cox regression analysis in the high-dimensional and low-sample size settings, with applications to microarray gene expression data
Differential and trajectory methods for time course gene expression data
False discovery rate, sensitivity and sample size for microarray studies
A variational Bayesian mixture modelling framework for cluster analysis of gene-expression data
Dual multiple change-point model leads to more accurate recombination detection
ANOVA-simultaneous component analysis (ASCA): a new tool for analyzing designed metabolomics data
pFind: a novel database-searching software system for automated peptide and protein identification via tandem mass spectrometry
S-SPatt: simple statistics for patterns on Markov chains
δρ-Web, an online tool to assess composition similarity of individual nucleic acid sequences
A web-based three-dimensional protein retrieval system by matching visual similarity
TFBScluster: a resource for the characterization of transcriptional regulatory networks
SNPLINK: multipoint linkage analysis of densely distributed SNP data incorporating automated linkage disequilibrium removal