Eukaryotic transcription factor binding sites—modeling and integrative search methods
Expected gene-order distances and model selection in bacteria
Simple is beautiful: a straightforward approach to improve the delineation of true and false positives in PSI-BLAST searches
Prediction of disordered regions in proteins based on the meta approach
Fast network component analysis (FastNCA) for gene regulatory network reconstruction from microarray data
Divisive Correlation Clustering Algorithm (DCCA) for grouping of genes: detecting varying patterns in expression profiles
Towards patterns tree of gene coexpression in eukaryotic species
Implementation of a regulatory gene network to simulate the TH1/2 differentiation in an agent-based model of hypersensitivity reactions
URL decay in MEDLINE—a 4-year follow-up study
Annotation-Modules: a tool for finding significant combinations of multisource annotations for gene lists
Mireval: a web tool for simple microRNA prediction in genome sequences
Accurate approximation method for prediction of class I MHC affinities for peptides of length 8, 10 and 11 using prediction tools trained on 9mers
MAMOT: hidden Markov modeling tool
OnD-CRF: predicting order and disorder in proteins conditional random fields
adegenet: a R package for the multivariate analysis of genetic markers
Analysing georeferenced population genetics data with Geneland: a new algorithm to deal with null alleles and a friendly graphical user interface
Forward-time simulations of non-random mating populations using simuPOP
MedEvi: Retrieving textual evidence of relations between biomedical concepts from Medline
IDMap: facilitating the detection of potential leads with therapeutic targets
swissPIT: a novel approach for pipelined analysis of mass spectrometry data
EPO-KB: a searchable knowledge base of biomarker to protein links