Phenotypic categorization of genetic skin diseases reveals new relations between phenotypes, genes and pathways
De novo computational prediction of non-coding RNA genes in prokaryotic genomes
Integrative clustering of multiple genomic data types using a joint latent variable model with application to breast and lung cancer subtype analysis
Predicting homologous signaling pathways using machine learning
Understanding hydrogen-bond patterns in proteins using network motifs
A boosting approach to structure learning of graphs with and without prior knowledge
Learning gene regulatory networks from gene expression measurements using non-parametric molecular kinetics
Identification of genes involved in the same pathways using a Hidden Markov Model-based approach
Mining gene functional networks to improve mass-spectrometry-based protein identification
Simultaneous inference of biological networks of multiple species from genome-wide data and evolutionary information : a semi-supervised approach
Improving peptide identification with single-stage mass spectrum peaks
Metabolite and reaction inference based on enzyme specificities
A dictionary to identify small molecules and drugs in free text
Characterization of 1H NMR spectroscopic data and the generation of synthetic validation sets
Flynet : a genomic resource for Drosophila melanogaster transcriptional regulatory networks
Mobyle : a new full web bioinformatics framework
A method for visualizing CellML models
Comparative analysis and unification of domain–domain interaction networks
Saint : a lightweight integration environment for model annotation
CellClassifier : supervised learning of cellular phenotypes
PubMed-EX : a web browser extension to enhance PubMed search with text mining features
digeR : a graphical user interface R package for analyzing 2D-DIGE data
UniMaP : finding unique mass and peptide signatures in the human proteome
Identifying related journals through log analysis
CMap 1.01 : a comparative mapping application for the Internet
Next generation software for functional trend analysis
QuickGO : a web-based tool for Gene Ontology searching