Effect of read-mapping biases on detecting allele-specific expression from RNA-sequencing data
A Bayesian approach to the alignment of mass spectra
Efficient estimation of pairwise distances between genomes
Integrated analysis of copy number alterations and gene expression
Inferring relative proportions of DNA variants from sequencing electropherograms
Significant speedup of database searches with HMMs by search space reduction with PSSM family models
Knowledge-based instantiation of full atomic detail into coarse-grain RNA 3D structural models
Detailing regulatory networks through large scale data integration
Pathway identification by network pruning in the metabolic network of Escherichia coli
Model aggregation
Estimating population haplotype frequencies from pooled SNP data using incomplete database information
Predicting citation count of Bioinformatics papers within four years of publication
A novel method for mining highly imbalanced high-throughput screening data in PubChem
Exon Array Analyzer
Response to comment on ‘Can sugars be produced from fatty acids? A test case for pathway analysis tools’