Genome-wide histone acetylation data improve prediction of mammalian transcription factor binding sites
EGM
Dealing with sparse data in predicting outcomes of HIV combination therapies
PERMORY
Global sequence characterization of rice centromeric satellite based on oligomer frequency analysis in large-scale sequencing data
An alignment-free method to identify candidate orthologous enhancers in multiple Drosophila genomes
Genome-wide functional element detection using pairwise statistical alignment outperforms multiple genome footprinting techniques
First insight into the prediction of protein folding rate change upon point mutation
Mining metabolic pathways through gene expression
Integration of pathway knowledge into a reweighted recursive feature elimination approach for risk stratification of cancer patients
Predictive models for population performance on real biological fitness landscapes
Prophossi
TRANSWESD
A system-level investigation into the cellular toxic response mechanism mediated by AhR signal transduction pathway
ROAST
Logic Forest
METAL
G-SQZ
PriorsEditor
mbmdr
TreesimJ
RPPanalyzer
BigWig and BigBed
CNVineta
Biological knowledge bases using Wikis
MamPhEA
Exchangeable random variables
Response to Letter to the Editor by Philip Good on To Permute or Not to Permute