A Gibbs sampling strategy applied to the mapping of ambiguous short-sequence tags
DRIMM-Synteny
Detecting two-locus associations allowing for interactions in genome-wide association studies
Reptile
GASSST
A discriminatory function for prediction of protein–DNA interactions based on alpha shape modeling
Identification of protein binding surfaces using surface triplet propensities
A study of the efficiency of pooling in haplotype estimation
Preferential use of protein domain pairs as interaction mediators
Probabilistic analysis of gene expression measurements from heterogeneous tissues
Semi-supervised recursively partitioned mixture models for identifying cancer subtypes
Module-based prediction approach for robust inter-study predictions in microarray data
Improving performances of suboptimal greedy iterative biclustering heuristics via localization
Automated construction and analysis of the design space for biochemical systems
Simple sequence-based kernels do not predict protein–protein interactions
miRNAkey
BioRuby
Circoletto
Deep and wide digging for binding motifs in ChIP-Seq data
2Struc
OpenStructure
Structural genomics of histone tail recognition
METAREP
RBSDesigner
TFInfer
DCGL
MetDAT
A cell-based simulation software for multi-cellular systems
Ontology- and graph-based similarity assessment in biological networks
Obtaining better quality final clustering by merging a collection of clusterings
The Chemical Translation Service—a web-based tool to improve standardization of metabolomic reports
ICPS