Noise reduction in genome-wide perturbation screens using linear mixed-effect models
KvSNP
Paired-end RAD-seq for de novo assembly and marker design without available reference
UCHIME improves sensitivity and speed of chimera detection
In silico analysis of phytoene synthase and its promoter reveals hints for regulation mechanisms of carotenogenesis in Duanliella bardawil
Gaia
Biologically inspired EM image alignment and neural reconstruction
Improving the prediction of disulfide bonds in Eukaryotes with machine learning methods and protein subcellular localization
Genomic data integration using guided clustering
RIP
MGV
Decomposing flux distributions into elementary flux modes in genome-scale metabolic networks
GeneNetWeaver
Enhancing the rate of scaffold discovery with diversity-oriented prioritization
Integration and visualization of host–pathogen data related to infectious diseases
The Cardiac Atlas Project—an imaging database for computational modeling and statistical atlases of the heart
Methyl-Analyzer—whole genome DNA methylation profiling
MetaABC—an integrated metagenomics platform for data adjustment, binning and clustering
In-depth annotation of SNPs arising from resequencing projects using NGS-SNP
ODORactor
HAPGEN2
SNPman
Menu-driven cloud computing and resource sharing for R and Bioconductor
AMIGO, a toolbox for advanced model identification in systems biology using global optimization
KEGGtranslator
Metab
eResponseNet
CAMPAIGN
Bioinformatics challenges for personalized medicine