Identification of novel transcripts in annotated genomes using RNA-Seq
TOTALRECALLER
A novel signal processing approach for the detection of copy number variations in the human genome
Sufficient statistics and expectation maximization algorithms in phylogenetic tree models
Tissue-specific prediction of directly regulated genes
DECOD
Computational reconstruction of primordial prototypes of elementary functional loops in modern proteins
Elemental composition determination based on MS n
A Grid-enabled web portal for NMR structure refinement with AMBER
Annotation concept synthesis and enrichment analysis
A rank-based statistical test for measuring synergistic effects between two gene sets
A Lasso regression model for the construction of microRNA-target regulatory networks
Tissue-specific subnetworks and characteristics of publicly available human protein interaction databases
BRISK—research-oriented storage kit for biology-related data
Making whole genome multiple alignments usable for biologists
PGAT
Simple high-throughput annotation pipeline (SHAP)
SpEED
MethylCoder
spacodiR
DivBayes and SubT
ModeRNA server
NASP
PREDA
IRiS
CytoscapeRPC
Simple Neurite Tracer
MetATT
StochKit2
Simulating systems genetics data with SysGenSIM
APCluster
RxnFinder
ontoCAT
CSO validator