The rise and fall of supervised machine learning techniques
Pyicos
MetaRank
KABOOM! A new suffix array based algorithm for clustering expression data
An assessment of substitution scores for protein profile–profile comparison
The design of optimal therapeutic small interfering RNA molecules targeting diverse strains of influenza A virus
An automatic method for CASP9 free modeling structure prediction assessment
Predicting residue–residue contacts using random forest models
STRIKE
Automatic rebuilding and optimization of crystallographic structures in the Protein Data Bank
Optimized application of penalized regression methods to diverse genomic data
A system-level approach for deciphering the transcriptional response to prion infection
Cascade detection for the extraction of localized sequence features; specificity results for HIV-1 protease and structure–function results for the Schellman loop
Pybedtools
Visualization and quality assessment of de novo genome assemblies
Mapping personal functional data to personal genomes
Enrich
VizPrimer
PoPoolation2
BioPAX support in CellDesigner
BDTcomparator