Time-course network analysis reveals TNF-α can promote G1/S transition of cell cycle in vascular endothelial cells
Detecting genome-wide epistases based on the clustering of relatively frequent items
Graph accordance of next-generation sequence assemblies
deepBlockAlign
Large-scale motif discovery using DNA Gray code and equiprobable oligomers
A novel structural position-specific scoring matrix for the prediction of protein secondary structures
Correcting for cancer genome size and tumour cell content enables better estimation of copy number alterations from next-generation sequence data
Determining the evolutionary history of gene families
Epigenetic priors for identifying active transcription factor binding sites
Using Poisson mixed-effects model to quantify transcript-level gene expression in RNA-Seq
Gene Ontology-driven inference of protein–protein interactions using inducers
Decompositions of large-scale biological systems based on dynamical properties
Multifunctional proteins revealed by overlapping clustering in protein interaction network
Protein subcellular localization of fluorescence imagery using spatial and transform domain features
Inferring gene regulatory networks from gene expression data by path consistency algorithm based on conditional mutual information
Expression2Kinases
MissForest—non-parametric missing value imputation for mixed-type data
SVGMap
Detecting differential binding of transcription factors with ChIP-seq
rNA
RAPSearch2
Dragon PolyA Spotter
AMPA
QuRe
A robust clustering algorithm for identifying problematic samples in genome-wide association studies
MR-Tandem
CellAnimation
PubChem promiscuity
AURA
Comments on ‘An empirical comparison of several recent epistatic interaction detection methods’
Response
Automated workflows for accurate mass-based putative metabolite identification in LC/MS-derived metabolomic datasets
Sensitive and fast mapping of di-base encoded reads