Determination of genomic copy number alteration emphasizing a restriction site-based strategy of genome re-sequencing
The code structure of the p53 DNA-binding domain and the prognosis of breast cancer patients
Exploring variation-aware contig graphs for (comparative) metagenomics using MaryGold
A statistical variant calling approach from pedigree information and local haplotyping with phase informative reads
Assessing the validity and reproducibility of genome-scale predictions
INSECT: IN-silico SEarch for Co-occurring Transcription factors
PyroHMMvar: a sensitive and accurate method to call short indels and SNPs for Ion Torrent and 454 data
A general species delimitation method with applications to phylogenetic placements
A new statistic for identifying batch effects in high-throughput genomic data that uses guided principal component analysis
A-clustering: a novel method for the detection of co-regulated methylation regions, and regions associated with exposure
Strengths and limitations of microarray-based phenotype prediction: lessons learned from the IMPROVER Diagnostic Signature Challenge
GIM3E: condition-specific models of cellular metabolism developed from metabolomics and expression data
DNorm: disease name normalization with pairwise learning to rank
Quantifying the complexity of medical research
DIST: direct imputation of summary statistics for unmeasured SNPs
cat RAPID omics : a web server for large-scale prediction of protein–RNA interactions
TALENoffer: genome-wide TALEN off-target prediction
Infernal 1.1: 100-fold faster RNA homology searches
Consed: a graphical editor for next-generation sequencing
RNAfbinv: an interactive Java application for fragment-based design of RNA sequences
RNA secondary structure diagrams for very large molecules: RNAfdl
SAMstrt: statistical test for differential expression in single-cell transcriptome with spike-in normalization
NetWeAvers: an R package for integrative biological network analysis with mass spectrometry data
Metriculator: quality assessment for mass spectrometry-based proteomics
The Xeno-glycomics database (XDB): a relational database of qualitative and quantitative pig glycome repertoire
M2SG: mapping human disease-related genetic variants to protein sequences and genomic loci
OntoQuery: easy-to-use web-based OWL querying
SubNet: a Java application for subnetwork extraction