Multi-factor data normalization enables the detection of copy number aberrations in amplicon sequencing data
MindTheGap: integrated detection and assembly of short and long insertions
Characterization of structural variants with single molecule and hybrid sequencing approaches
Detecting differential peaks in ChIP-seq signals with ODIN
SplitMEM: a graphical algorithm for pan-genome analysis with suffix skips
Gustaf: Detecting and correctly classifying SVs in the NGS twilight zone
Resolving complex tandem repeats with long reads
Journaled string tree—a scalable data structure for analyzing thousands of similar genomes on your laptop
LoRDEC: accurate and efficient long read error correction
String graph construction using incremental hashing
Merging of multi-string BWTs with applications
Quantifying tumor heterogeneity in whole-genome and whole-exome sequencing data
KmerStream: streaming algorithms for k -mer abundance estimation
TIPP: taxonomic identification and phylogenetic profiling
Chimera: a Bioconductor package for secondary analysis of fusion products
The Naked Mole Rat Genome Resource: facilitating analyses of cancer and longevity-related adaptations
Human structural proteome-wide characterization of Cyclosporine A targets
PrEMeR-CG: inferring nucleotide level DNA methylation values from MethylCap-seq data
Frameshift alignment: statistics and post-genomic applications
Protein–protein binding affinity prediction from amino acid sequence
Amplicon identification using SparsE representation of multiplex PYROsequencing signal (AdvISER-M-PYRO): application to bacterial resistance genotyping
Limbform: a functional ontology-based database of limb regeneration experiments