Hierarchical block matrices as efficient representations of chromosome topologies and their application for 3C data integration
Joint detection of copy number variations in parent-offspring trios
CASSIS and SMIPS
DeNovo
OMPPM
Improved topology prediction using the terminal hydrophobic helices rule
Prediction of the permeability of neutral drugs inferred from their solvation properties
Computational identification of piRNA targets on mouse mRNAs
Adaptive gene- and pathway-trait association testing with GWAS summary statistics
Extending gene ontology with gene association networks
Fuse
Fast integration-based prediction bands for ordinary differential equation models
DNAshapeR
traseR
MCAST
Manta
NBSPred
FuMa
INSECT 2.0
OfftargetFinder
CG2AA
Foldalign 2.5
destiny
PharmacoGx
Integrating, summarizing and visualizing GWAS-hits and human diversity with DANCE (Disease-ANCEstry networks)
Fitchi
HitWalker2
BioFVM
CytoGEDEVO—global alignment of biological networks with Cytoscape
PaxtoolsR
FluxModeCalculator
qsubsec
MSAcquisitionSimulator
rcellminer
Sequence database versioning for command line and Galaxy bioinformatics servers
SpotCaliper