LOCUST: a custom sequence locus typer for classifying microbial isolates

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Abstract

Summary:

LOCUST is a custom sequence locus typer tool for classifying microbial genomes. It provides a fully automated opportunity to customize the classification of genome-wide nucleotide variant data most relevant to biological research.

Availability and Implementation:

Source code, demo data, and detailed documentation are freely available at http://sourceforge.net/projects/locustyper.

Contact:

lbrinkac@jcvi.org

Supplementary information:

Supplementary data are available at Bioinformatics online.

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