Aozan: an automated post-sequencing data-processing pipeline

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Data management and quality control of output from Illumina sequencers is a disk space- and time-consuming task. Thus, we developed Aozan to automatically handle data transfer, demultiplexing, conversion and quality control once a run has finished. This software greatly improves run data management and the monitoring of run statistics via automatic emails and HTML web reports.

Availability and Implementation:

Aozan is implemented in Java and Python, supported on Linux systems, and distributed under the GPLv3 License at: Aozan source code is available on GitHub:


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