Due to the diminishing popularity of systems thinking, an attempt is done to predict its future in the university world. Two starting points are used: one in the traditional scientific community, being its habitat: and the other in the surrounding society, being its area of application. The investigation shows that systems thinking is highly needed, although its nearest future seems bleak. The systemic challenge to the traditional academic world has unfortunately been taken as a threat against its existence. The scientific and educational impact of systems thinking is therefore opposed as an alternative to the old scientific paradigm. Furthermore, the resistance to new theories moving across disciplinary boundaries seems stronger than resistance to theories within the disciplines.