Effective online Bayesian phylogenetics via sequential Monte Carlo with guided proposals
Improbable Destinies, Fate, Chance, and the Future of Evolution
Complex Models of Sequence Evolution Require Accurate Estimators as Exemplified with the Invariable Site plus Gamma Model
Corrigendum to : “Probabilistic Distances Between Trees”
A Two-State Model of Tree Evolution and Its Applications to Alu Retrotransposition
The Efficacy of Consensus Tree Methods for Summarizing Phylogenetic Relationships from a Posterior Sample of Trees Estimated from Morphological Data
Reconstructing Ecological Niche Evolution When Niches Are Incompletely Characterized
Coestimating Reticulate Phylogenies and Gene Trees from Multilocus Sequence Data
Estimating Age-Dependent Extinction : Contrasting Evidence from Fossils and Phylogenies
An Assessment of Phylogenetic Tools for Analyzing the Interplay Between Interspecific Interactions and Phenotypic Evolution
Probabilistic Distances Between Trees
Targeted Enrichment of Large Gene Families for Phylogenetic Inference : Phylogeny and Molecular Evolution of Photosynthesis Genes in the Portullugo Clade (Caryophyllales)
Analysis of Phylogenomic Tree Space Resolves Relationships Among Marsupial Families
A General Model for Estimating Macroevolutionary Landscapes
To include or not to include : The Impact of Gene Filtering on Species Tree Estimation Methods
The Past Sure Is Tense : On Interpreting Phylogenetic Divergence Time Estimates
Impact of Model Violations on the Inference of Species Boundaries Under the Multispecies Coalescent
Issues and Perspectives in Species Delimitation using Phenotypic Data : Atlantean Evolution in Darwin’s Finches
Use of Continuous Traits Can Improve Morphological Phylogenetics
Conflicting Evolutionary Histories of the Mitochondrial and Nuclear Genomes in New World Myotis Bats
Phylogenetic Factor Analysis
Modeling Site Heterogeneity with Posterior Mean Site Frequency Profiles Accelerates Accurate Phylogenomic Estimation
Cladogenetic and Anagenetic Models of Chromosome Number Evolution : A Bayesian Model Averaging Approach
Multivariate Phylogenetic Comparative Methods : Evaluations, Comparisons, and Recommendations
Genomic Signature of an Avian Lilliput Effect across the K-Pg Extinction
Resolving Recent Plant Radiations : Power and Robustness of Genotyping-by-Sequencing
Why Concatenation Fails Near the Anomaly Zone
An Evaluation of Different Partitioning Strategies for Bayesian Estimation of Species Divergence Times
Taming the BEAST—A Community Teaching Material Resource for BEAST 2
When Homoplasy Is Not Homoplasy : Dissecting Trait Evolution by Contrasting Composite and Reductive Coding
Millions of Years Behind : Slow Adaptation of Ruminants to Grasslands
Resolving Relationships among the Megadiverse Butterflies and Moths with a Novel Pipeline for Anchored Phylogenomics
Lineage Diversity and Size Disparity in Musteloidea : Testing Patterns of Adaptive Radiation Using Molecular and Fossil-Based Methods
Crowds Replicate Performance of Scientific Experts Scoring Phylogenetic Matrices of Phenotypes
Contact process with exogenous infection and the scaled SIS process
Combined Analysis of Extant Rhynchonellida (Brachiopoda) using Morphological and Molecular Data
A Metric on Phylogenetic Tree Shapes